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When you need a quick, healthy, and satisfying meal that works for breakfast, lunch, or even a light dinner, this high protein tortilla cottage cheese egg bake is a winner. It’s the perfect mix of simple ingredients, plenty of protein, and just enough cheese to keep things delicious.

Thanks to the tortilla crust and cottage cheese, you get a dish that’s both light and filling — without a heavy load of carbs.

This is one of those WW friendly recipes that looks impressive but comes together in minutes. My mom spotted the idea on Facebook and passed it along, and now it’s a regular in my house. It’s endlessly customizable, so you can make it your own with whatever protein, veggies, or cheese you have on hand.

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Slice of cottage cheese egg bake on small plate in front of cottage cheese egg bake casserole in glass pie dish.

Why You’ll Love This High Protein Egg Bake

  • Packed with Protein – Eggs, cottage cheese, lean ham, and reduced-fat cheese add up to a protein-rich meal that keeps you full for hours.
  • WW Friendly and Low Carb – A smart choice for anyone tracking points or cutting back on carbs without giving up flavor.
  • Versatile Anytime Meal – Perfect for breakfast with fruit, or pair it with a salad or soup for lunch or dinner.
  • Easy to Customize – Swap in turkey sausage, different veggies, or your favorite cheese.
  • Great for Meal Prep – Slice it into portions and store leftovers in the fridge for easy meals throughout the week.

This dish is so versatile—it’s just as delightful served warm right out of the oven as it is reheated for a quick meal. Whether you are starting your day or winding it down, it is a dish you’ll come back to again and again.

Remove slice of Tortilla cottage Cheese Egg Bake from a glass pie dish with a spatula.

How Many Calories and WW Points in this Low Carb Cottage Cheese Egg Tortilla Bake?

According to my calculations, each serving (1/4th of the recipe) has 150 calories and 3 WW Points.

To see your WW Points for this recipe, track it in the WW App!
(You must be logged into WW on a smartphone or tablet.)

Ingredients and Substitutions

  • Eggs – Use whole eggs, all whites, or a combo depending on your preferences.
  • Cottage Cheese – Fat-free keeps the WW Points lowest, but low-fat or regular also work. Adds protein and creaminess.
  • Chopped Lean Ham – Deli ham, turkey ham, or even leftover chicken or turkey.
  • Fresh Spinach – Sub with kale, Swiss chard, or arugula. Frozen spinach works too (just thaw and squeeze dry).
  • Tomato – Cherry, grape, or any ripe tomato, diced.
  • Shredded Reduced-Fat Cheddar – Or swap in mozzarella, feta, Monterey Jack, or pepper jack for a flavor twist.
  • Low Carb Tortilla (affiliate link) – The base “crust.” Use whole wheat, lavash, corn (gluten-free option), or skip the tortilla entirely for a crustless version.
Ingredients including 3 eggs, chopped cherry tomatoes, chopped spinach, chopped ham, cottage cheese, shredded cheese and a low carb tortilla in a glass pie dish.

How to Make This Cottage Cheese Egg Bake Casserole, Step-by-Step

Step 1: Preheat and Prep

Heat your oven to 350°F (175°C). Spray a pie plate (affiliate link) or small baking dish with nonstick spray and press the tortilla into the dish to form a crust.

Step 2: Mix It Up

In a medium bowl, whisk together the eggs and cottage cheese. Season with salt and pepper, then pour this mixture over the tortilla.

Tortilla in glass pie dish topped with a mixture of cottage cheese and eggs.

Step 3: Layer the toppings

Add spinach, ham, and tomato on top of the egg mixture. Sprinkle cheese evenly over everything.

Unbaked Tortilla Cottage Cheese Egg Bake in a glass pie dish.

Step 4: Bake

Bake 20–25 minutes until eggs are set, tortilla is crisp, and cheese is bubbly. Let cool slightly before slicing.

(Air Fryer Option: Cook at 350ºF for 15–17 minutes until firm and lightly golden.)

Fresh baked Tortilla Cottage Cheese Egg Bake with spinach, ham and cheese in a glass pie dish.

Ways to Switch It Up

  • Protein Boost – Use turkey sausage, chicken sausage, or even leftover rotisserie chicken.
  • Veggie Options – Add mushrooms, bell peppers, or zucchini.
  • Cheese Swaps – Try feta, pepper jack, or Monterey Jack.
  • No Tortilla? – Make it crustless by baking the mixture directly in the dish.

This recipe is here for you when you need a meal that’s simple, satisfying, and adaptable to whatever you have on hand.

Serving Suggestions

Storage and Leftovers

  • Store in an airtight container in the fridge for up to 3 days.
  • Reheat slices in the microwave (affiliate link) (30–60 seconds) or in the air fryer/oven until warm.
  • Great for meal prep — portion into individual servings for grab-and-go meals.

If you’ve made this low carb Tortilla Cottage Cheese Egg Bake, please give the recipe a star rating below and leave a comment letting me know how you liked it. And stay in touch on Pinterest, Facebook, Instagram and Twitter for the latest updates.

Pie plate filled with tortilla cottage cheese egg bake
5 from 2 votes

Tortilla Cottage Cheese Egg Bake

When you need something quick, healthy, and totally delicious that works for breakfast, lunch, or even a light dinner, this egg bake is your answer.
Prep: 15 minutes
Cook: 25 minutes
Total: 40 minutes
Servings: 4
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Ingredients 

  • 1 8-10-inch low carb tortilla (affiliate link)
  • 3 large eggs
  • 1/2 cup fat free cottage cheese
  • 1/2 cup chopped lean ham
  • 2 cups chopped fresh spinach
  • 1/2 cup chopped tomatoes
  • 1/2 cup shredded reduced fat cheese

Instructions 

  • Preheat and Prep: Heat your oven to 350°F (175°C). Spray a pie plate (affiliate link) or small baking dish with nonstick spray and press the tortilla into the dish to form a crust.
  • Mix It Up: In a medium bowl, whisk together the eggs and cottage cheese. Season with salt and pepper, then pour this mixture over the tortilla.
  • Top It Off: Layer the spinach, ham, and tomato on top of the egg mixture. Sprinkle the shredded cheese over everything.
  • Bake: Pop it in the oven for 20 to 25 minutes, or until the eggs are set, the tortilla is golden, and the cheese is bubbly. Let it cool slightly before slicing. Set air fryer to 350ºF. Cook until firm, cooked through, and light golden brown, 15–17 minutes.

Notes

Servings: 4
WW Points: 3
Check your WW Points for this recipe and track it in the WW app.
(You must be logged into WW on a smartphone or tablet.)
4 PointsPlus (Old WW Plan)
Ways to Switch It Up
  • Protein Options: Use cooked turkey bacon, chicken sausage, or even leftover roast chicken instead of ham. Vegetarian? Skip the meat entirely or try plant-based sausage.
  • Veggie Love: Sub spinach with kale, Swiss chard, or arugula. Add mushrooms, diced bell peppers, or leftover roasted veggies for more color and flavor.
  • Cheese Choices: Swap cheddar for feta, Monterey Jack, or even a spicy pepper jack.
  • Tortilla Talk: If you don’t have a low-carb tortilla, try a regular whole wheat tortilla or even a lavash wrap. For a gluten-free option, use a corn tortilla or skip it entirely and bake the filling directly in the dish.

Nutrition

Serving: 0.25Recipe, Calories: 150kcal, Carbohydrates: 8g, Protein: 16g, Fat: 7g, Saturated Fat: 2g, Polyunsaturated Fat: 1g, Monounsaturated Fat: 2g, Trans Fat: 0.01g, Cholesterol: 155mg, Sodium: 464mg, Potassium: 280mg, Fiber: 3g, Sugar: 2g, Vitamin A: 1676IU, Vitamin C: 10mg, Calcium: 129mg, Iron: 2mg

Nutrition information is automatically calculated, so should only be used as an approximation.

Additional Info

Course: Breakfast, Brunch, Lunch
Cuisine: American
Tried this recipe?Mention @simplenourishedliving or tag #simplenourishedliving!

Recipe source: Mom, Facebook

More Easy High Protein Breakfast Recipes

If you liked this cottage cheese tortilla egg bake, you might also enjoy these other WW-friendly ideas:

Make Healthy Eating Even Easier

If you enjoy simple, satisfying recipes like this, you’ll love my Ultimate eCookbook Bundle. It is packed with Weight Watchers–friendly recipes designed to make meal planning easier and keep you on track without feeling deprived.

About Martha McKinnon

Weight Watchers Lifetime Member, Yoga Practitioner and Blogger who loves to share her passion for trying to create a happy, healthy, balanced life in what often feels like an overwhelming out of control world.

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5 from 2 votes

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6 Comments

  1. 5 stars
    This recipe is so easy and while it was baking I made Marthaโ€™s Ham, Egg and Cheese cups recipe.
    I did have to bake the tortilla recipe 7 min. longer because the fresh spinach was watery as it baked and I wanted the egg filling done. I topped this with pico and it was delicious!

  2. 5 stars
    Economical main dish that was ready start to finish in 45 minutes. My husband loved it and asked me to make it again.

  3. Hi Martha,
    I love using FF cottage cheese! I was excited to see that you were sharing today 50 recipes, but I have looked through your post twice and can’t find a link to the other 49 recipes.

    I have made the Cottage Cheese Egg Bake before, but without the tortilla. It’s yummy. I never thought of using a tortilla as a “crust.”

    I use cottage cheese to lower the points on things I enjoy. I use it on baked potatoes – Just fat free cottage cheese, salt & pepper, and diced green peppers and tomatoes. No butter or sour cream really cuts the points. I also add it to guacamole. I find the taste of the guacamole to be the same, but it’s much more filling, so I eat less of it. I think for a lot of people, it’s the texture that they don’t like, so you can puree it in the blender before using it. I also add it to scrambled eggs for some more protein. I’ve made the WW chocolate chip cheesecake that uses cottage cheese – it’s wonderful – our guests had no idea it was a low cal recipe.

    Thanks for all you recipes and posts!